SpliPath/.Rhistory at main · KennaLab/SpliPath · GitHub

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setwd("/Users/ywang3/Documents/Tools/SpliPath/")
devtools::document()
library(devtools)
install.packages("devtools")
devtools::document()
correctGeneExp
getwd()
devtools::document()
rlang::last_trace()
devtools::document()
devtools::document()
help(querHits)
help(queryHits)
S4::queryHits
gr1 <- GRanges(seqnames="I", ranges=IRanges(start=seq(10, 30, 10), width=5), strand="+")
gr1 <- GenomicRanges::GRanges(seqnames="I", ranges=GenomicRanges::IRanges(start=seq(10, 30, 10), width=5), strand="+")
gr1 <- GenomicRanges::GRanges(seqnames="I", ranges=IRanges::IRanges(start=seq(10, 30, 10), width=5), strand="+")
gr2 <- GenomicRanges::GRanges(seqnames="I", ranges=IRanges::IRanges(start=seq(10, 30, 10), width=5), strand="+")
overlaps = GenomicRanges::absoluteRanges()findOverlaps(gr1,gr2)
overlaps = GenomicRanges::findOverlaps(gr1,gr2)
overlaps
overlaps$queryHits
overlaps@from
overlaps@to
queryHits(overlaps)
overlaps@
overlaps@elementMetadata
data.frame(overlaps)
data.frame(overlaps)$queryHits
class(data.frame(overlaps)$queryHits)
help(rowData)