ikpykit/pyproject.toml at main · IsolationKernel/ikpykit · GitHub

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[project]
name = "ikpykit"
dynamic = ["version"]
description = "Isolation Kernel Toolkit in Python."
readme = "README.md"
authors = [
    { name = "Xin Han", email = "xhan197@outlook.com" },
    { name = "Yixiao Ma", email = "mayx@lamda.nju.edu.cn" },
    { name = "Ye Zhu", email = "ye.zhu@ieee.org" },
    { name = "Kaiming Ting", email = "tingkm@nju.edu.cn" },
]
classifiers = [
    "Operating System :: MacOS",
    "Operating System :: Microsoft :: Windows",
    "Operating System :: POSIX",
    "Operating System :: Unix",
    "Programming Language :: Python",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "License :: OSI Approved :: BSD License",
]
keywords = [
    "data-science",
    "machine-learning",
    "data-mining",
    "anomaly detection",
    "scikit-learn",
    "cluster",
    "graph embedding",
    "isolation kernel",
]
dependencies = [
    "numba>=0.60.0",
    "numpy>=2.0.2",
    "pandas>=2.3.3",
    "scikit-learn>=1.6.1",
    "tqdm>=4.67.1",
]
requires-python = ">=3.9"

[project.license]
file = "LICENSE"

[project.urls]
Homepage = "https://isolationkernel.github.io/ikpykit/"
Repository = "https://github.com/IsolationKernel/ikpykit"
Documentation = "https://isolationkernel.github.io/ikpykit/"
"Release Notes" = "https://isolationkernel.github.io/ikpykit/latest/releases/releases"

[build-system]
requires = ["hatchling", "uv-dynamic-versioning>=0.7.0"]
build-backend = "hatchling.build"

[tool.hatch.version]
source = "uv-dynamic-versioning"

[tool.hatch.metadata]
allow-direct-references = true

[tool.hatch.build.hooks.version]
path = "ikpykit/_version.py"

[tool.uv-dynamic-versioning]
vcs = "git"
style = "pep440"
bump = true
fallback-version = "0.0.0"

[tool.pytest.ini_options]
asyncio_mode = "auto"
# filterwarnings = ["error::DeprecationWarning"]
filterwarnings = [
    # Suppress OAuth in-memory token storage warnings in tests
    # Tests intentionally use ephemeral storage; this warning is for end users
    "ignore:Using in-memory token storage:UserWarning",
]
timeout = 30

[tool.uv]
default-groups = ["dev", "lint", "docs"]

[dependency-groups]
dev = [
    "pytest>=8.4.2",
    "pytest-asyncio>=1.2.0",
    "pytest-cov>=7.0.0",
    "pytest-timeout>=2.4.0",
]
docs = [
    "black==25.11.0",
    "jupyter-contrib-nbextensions==0.7.0",
    "matplotlib>=3.9.0",
    "mike==2.1.4",
    "mkdocs==1.6.1",
    "mkdocs-jupyter==0.26.1",
    "mkdocstrings==0.30.1",
    "mkdocstrings-python==1.18.2",
    "notebook==6.4.12",
]
lint = ["black==25.11.0", "pre-commit>=4.3.0", "ruff>=0.14.5"]

[tool.black]
line-length = 88
target-version = ["py39"]

[tool.ruff.lint]
fixable = ["ALL"]
ignore = [
    "COM812",
    "PLR0913", # Too many arguments, sometimes necessary
    "SIM102", # Dont require combining if statements

]
extend-select = [
    "B", # flake8-bugbear: Catches actual bugs like mutable default arguments
    "C4", # flake8-comprehensions: More efficient/readable comprehensions
    "I", # flake8-builtins: Catches builtins that are not explicitly imported
    "PIE", # flake8-pie: More idiomatic Python code
    "RUF", # Ruff-specific: Modern best practices unique to Ruff
    "SIM", # flake8-simplify: Simplifies verbose code patterns
    "UP", # flake8-unused-imports: Catches unused imports

]

[tool.ruff.lint.per-file-ignores]
"__init__.py" = ["F401", "I001", "RUF013"]
# allow imports not at the top of the file
"ikpykit/__init__.py" = ["E402"]
"!ikpykit/**.py" = [
    # Only enforce extended ruff rules for code in ikpykit/
    "B", # flake8-bugbear
    "C4", # flake8-comprehensions
    "PIE", # flake8-pie
    "RUF", # Ruff-specific
    "SIM", # flake8-simplify

]

[tool.codespell]
ignore-words-list = "asend,shttp,te"