keep the QIIME2 TSV output

cjfields · cjfields · commit cae298277da5 · 2025-12-01T14:17:36.000-06:00
diff --git a/conf/modules.config b/conf/modules.config
@@ -383,7 +383,7 @@ process {
     withName: DADA2_SEQTABLE2TEXT {
         publishDir = [
             [
-                path: { "${params.outdir}/Intermediate/Seqtable2Text" },
+                path: { "${params.outdir}/TADA/Text/TSV" },
                 mode: params.publish_dir_mode,
                 pattern: 'seqtab.qiime2.txt'
             ],

Original file line number	Diff line number	Diff line change
`@@ -383,7 +383,7 @@ process {`
`383`	`383`	`withName: DADA2_SEQTABLE2TEXT {`
`384`	`384`	`publishDir = [`
`385`	`385`	`[`
`386`		`- path: { "${params.outdir}/Intermediate/Seqtable2Text" },`
	`386`	`+ path: { "${params.outdir}/TADA/Text/TSV" },`
`387`	`387`	`mode: params.publish_dir_mode,`
`388`	`388`	`pattern: 'seqtab.qiime2.txt'`
`389`	`389`	`],`