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DESCRIPTION
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27 lines (27 loc) · 858 Bytes
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Package: EPIC
Type: Package
Title: Estimate the Proportion of Immune and Cancer cells
Version: 1.1.7
Authors@R: as.person(c(
"Julien Racle <julien.racle@unil.ch> [aut, cre]",
"David Gfeller <david.gfeller@unil.ch> [aut]"
))
Description: Package implementing EPIC method to estimate the proportion of
immune, stromal, endothelial and cancer or other cells from bulk gene
expression data.
It is based on reference gene expression profiles for the main non-malignant
cell types and it predicts the proportion of these cells and of the
remaining "other cells" (that are mostly cancer cells) for which no
reference profile is given.
Depends:
R (>= 3.2.0)
License: file LICENSE
LazyData: TRUE
RoxygenNote: 7.2.1
Suggests:
testthat,
knitr,
rmarkdown
Imports:
stats
VignetteBuilder: knitr