variation-normalizer-manuscript/.gitignore at main · GenomicMedLab/variation-normalizer-manuscript · GitHub

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*.pyc
__pycache__/

instance/

.pytest_cache/
.coverage
.coverage.*
htmlcov/
.vim/

dist/
*.egg-info/

.DS_Store

.mypy_cache/

.python-version

# Jupyter Notebook
.ipynb_checkpoints/

# Logs
*.log

build/
dynamodb_local_latest/

# Env files
.env

# pickle files
*.pkl

# venv
.venv
venv

# json files
*.json

# GENIE data
analysis/genie/pre_variant_analysis/*.txt
analysis/genie/pre_variant_analysis/*.zip
analysis/genie/pre_variant_analysis/variation_normalizer_output/
analysis/genie/variant_analysis/variant_analysis_output
analysis/clinvar/vi-normalized-with-liftover.jsonl.gz

# html files
*.html

# CNVC analysis and output data
analysis/cnvs/cnv_data

# ClinVar data
output-variation_identity-vrs-1.3.ndjson
output-variation_identity-vrs-1.3.ndjson.gz

# Merged soures
impact_scatterpie_plot.jpeg

# Data
analysis/data