fpsimp/Dockerfile.colabfold.worker at main · Fluorescence-Tools/fpsimp · GitHub

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# Clean ColabFold Worker
# Minimal container with only ColabFold and simple worker script

FROM --platform=linux/amd64 fpsimp-stack-web

# Set environment variables
ENV DEBIAN_FRONTEND=noninteractive

# Install system dependencies
RUN apt-get update && apt-get install -y \
    wget \
    curl \
    git \
    bzip2 \
    unzip \
    aria2 \
    ca-certificates \
    python3 \
    python3-pip \
    && rm -rf /var/lib/apt/lists/*

# Set working directory
WORKDIR /colabfold

# Download and run the ColabFold installation script (x86_64)
RUN wget https://raw.githubusercontent.com/YoshitakaMo/localcolabfold/main/install_colabbatch_linux.sh \
    && chmod +x install_colabbatch_linux.sh \
    && ./install_colabbatch_linux.sh \
    && rm install_colabbatch_linux.sh

# Set environment variables for ColabFold
ENV PATH="/colabfold/localcolabfold/colabfold-conda/bin:$PATH"
ENV LD_LIBRARY_PATH="/colabfold/localcolabfold/colabfold-conda/lib:${LD_LIBRARY_PATH}"

# Copy the worker scripts
COPY worker/ /colabfold/worker/
RUN chmod +x /colabfold/worker/colabfold_worker.py

# Create directories
RUN mkdir -p /colabfold/input /colabfold/output /colabfold/temp /colabfold/results /colabfold/database

# Default command - show help
CMD ["python", "/colabfold/worker/colabfold_worker.py", "--help"]