severus change severus path

Author: nidhi12k

severus/1.6/Dockerfile

@@ -30,13 +30,13 @@ RUN apt-get -qqy update --fix-missing && \
 #RUN wget https://github.com/KolmogorovLab/Severus/archive/refs/tags/1.6.tar.gz && tar -zxvf 1.6.tar.gz 
 
 
-COPY ./environment.yml /environment.yml
+#COPY ./environment.yml /environment.yml
 
 RUN git clone https://github.com/KolmogorovLab/Severus.git 
-#RUN cd Severus
-RUN conda env create --name severus --file /environment.yml && conda clean -a
+RUN cd Severus && conda env create --name severus_env --file /opt/Severus/environment.yml && conda clean -a
 #RUN conda activate severus_env
 RUN echo "conda activate severus" >> ~/.bashrc
 RUN echo "/opt/Severus/severus.py" >> ~/.bashrc
 #ENV PATH="/opt/conda/envs/severus/bin:${PATH}"
+#ENV PATH="/opt/Severus/:${PATH}"
 ENV PATH="/opt/Severus/:${PATH}"