README.md

Two-dimensional mechanic-based models of collective migration of tandem cell pairs

Based on pre-print: https://www.biorxiv.org/content/10.1101/2025.01.30.635787v1.abstract A Morse potential is used to describe cell-cell adhesion at the intercellular junction.

List of directory:

1. Configurations:

   Initial configurations of cell boundary and cell-matrix adhesions of each cell in the doublet

2. Model_simulation:

   C/C++ codes for simulating models with input files from "Configuration"

3. Result_processing:

   MATLAB codes for producing kymographs of traction stresses and doublet length over time using simulation data from running C/C++ codes

4. Example

   Examples of kymographs, doublet length over time, and movies