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SHELL := /usr/bin/env bash
.SHELLFLAGS := -o pipefail -c
DC_START_CMD := up -d
DC_STOP_CMD := stop
DC_DOWN_CMD := down
define WITH_ENV
set -a && source ./export_env_vars.sh;
endef
# utility commands
git-freeze-security:
@../scripts/git_freeze_security.sh
git-unfreeze-security:
@../scripts/git_unfreeze_security.sh
git-update-submodules:
@../scripts/git_update_submodules_in_repo.sh
load-env:
$(WITH_ENV) echo "Environment variables loaded."
show-env:
${WITH_ENV} >/dev/null 2>&1; printenv | sort
fix-nifi-registry-perms:
$(WITH_ENV) SKIP_EXPORT_ENV=1 ../nifi/fix_nifi_registry_perms.sh $(COMPOSE_FILE)
# start services
start-nifi:
$(WITH_ENV) SKIP_EXPORT_ENV=1 ../nifi/fix_nifi_registry_perms.sh services.yml; \
docker compose -f services.yml $(DC_START_CMD) nifi nifi-nginx
start-nifi-dev:
$(WITH_ENV) SKIP_EXPORT_ENV=1 ../nifi/fix_nifi_registry_perms.sh services.dev.yml; \
docker compose -f services.dev.yml $(DC_START_CMD) nifi nifi-nginx
start-nifi-dev-build:
$(WITH_ENV) SKIP_EXPORT_ENV=1 ../nifi/fix_nifi_registry_perms.sh services.dev.yml; \
docker compose -f services.dev.yml up -d --build nifi nifi-nginx
start-elastic:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) elasticsearch-1 elasticsearch-2 kibana
start-elastic-cluster:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) elasticsearch-1 elasticsearch-2 elasticsearch-3
start-elastic-1:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) elasticsearch-1
start-elastic-2:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) elasticsearch-2
start-elastic-3:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) elasticsearch-3
start-metricbeat-1:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) metricbeat-1
start-metricbeat-2:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) metricbeat-2
start-metricbeat-3:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) metricbeat-3
start-filebeat-1:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) filebeat-1
start-filebeat-2:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) filebeat-2
start-filebeat-3:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) filebeat-3
start-kibana:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) kibana
start-samples:
$(WITH_ENV) docker compose -f services.yml $(DC_START_CMD) samples-db
start-jupyter:
$(WITH_ENV) docker compose -f ../services/cogstack-jupyter-hub/docker/docker-compose.base.yml -f ../services/cogstack-jupyter-hub/docker/docker-compose.prod.yml $(DC_START_CMD) cogstack-jupyter-hub
start-medcat-service:
$(WITH_ENV) docker compose -f ../services/cogstack-nlp/medcat-service/docker/docker-compose.yml $(DC_START_CMD) nlp-medcat-service-production
start-medcat-service-deid:
$(WITH_ENV) docker compose -f ../services/cogstack-nlp/medcat-service/docker/docker-compose.yml $(DC_START_CMD) nlp-medcat-service-production-deid
start-medcat-trainer:
$(WITH_ENV) docker compose -f ../services/cogstack-nlp/medcat-trainer/docker-compose-prod.yml $(DC_START_CMD) medcattrainer nginx solr
start-production-db:
$(WITH_ENV) docker compose -f services.yml ${DC_START_CMD} cogstack-databank-db
start-ocr-services:
$(WITH_ENV) docker compose -f ../services/ocr-service/docker/docker-compose.base.yml -f ../services/ocr-service/docker/docker-compose.prod.yml $(DC_START_CMD) ocr-service ocr-service-text-only
start-git-ea:
$(WITH_ENV) docker compose -f services.yml ${DC_START_CMD} gitea
start-data-infra: start-nifi start-elastic start-samples
start-all: start-data-infra start-jupyter start-medcat-service start-ocr-services
.PHONY: start-all start-data-infra start-nifi start-nifi-dev start-nifi-dev-build start-elastic start-samples start-jupyter fix-nifi-registry-perms
# stop services
#
stop-nifi:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) nifi nifi-nginx
stop-nifi-dev:
$(WITH_ENV) docker compose -f services.dev.yml $(DC_STOP_CMD) nifi nifi-nginx
delete-nifi: delete-nifi-containers
delete-nifi-containers:
$(WITH_ENV) docker compose -f services.yml rm -f -s nifi nifi-nginx
delete-nifi-dev-containers:
$(WITH_ENV) docker compose -f services.dev.yml rm -f -s nifi nifi-nginx
delete-nifi-images:
$(WITH_ENV) images="$$(docker compose -f services.yml config --images nifi nifi-nginx | sort -u)"; \
if [ -n "$$images" ]; then \
docker image rm -f $$images; \
else \
echo "No NiFi images found in services.yml"; \
fi
delete-nifi-dev-images:
$(WITH_ENV) images="$$(docker compose -f services.dev.yml config --images nifi nifi-nginx | sort -u)"; \
if [ -n "$$images" ]; then \
docker image rm -f $$images; \
else \
echo "No NiFi images found in services.dev.yml"; \
fi
delete-nifi-volumes:
$(WITH_ENV) docker compose -f services.yml $(DC_DOWN_CMD) -v nifi nifi-nginx
delete-elastic:
$(WITH_ENV) docker compose -f services.yml rm -f -s elasticsearch-1 elasticsearch-2 elasticsearch-3 kibana
delete-elastic-volumes:
$(WITH_ENV) docker compose -f services.yml $(DC_DOWN_CMD) -v elasticsearch-1 elasticsearch-2 elasticsearch-3 kibana
delete-databank:
$(WITH_ENV) docker compose -f services.yml rm -f -s cogstack-databank-db cogstack-databank-db-mssql
delete-databank-volumes:
$(WITH_ENV) docker compose -f services.yml $(DC_DOWN_CMD) -v cogstack-databank-db cogstack-databank-db-mssql
delete-samples-db:
$(WITH_ENV) docker compose -f services.yml rm -f -s samples-db
delete-samples-db-volumes:
$(WITH_ENV) docker compose -f services.yml $(DC_DOWN_CMD) -v samples-db
stop-elastic:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) elasticsearch-1 elasticsearch-2 kibana
stop-elastic-cluster:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) elasticsearch-1 elasticsearch-2
stop-elastic-1:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) elasticsearch-1
stop-elastic-2:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) elasticsearch-2
stop-elastic-3:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) elasticsearch-3
stop-metricbeat-1:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) metricbeat-1
stop-metricbeat-2:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) metricbeat-2
stop-filebeat-1:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) filebeat-1
stop-filebeat-2:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) filebeat-2
stop-filebeat-3:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) filebeat-3
stop-kibana:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) kibana
stop-samples:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) samples-db
stop-jupyter:
$(WITH_ENV) docker compose -f ../services/cogstack-jupyter-hub/docker/docker-compose.base.yml -f ../services/cogstack-jupyter-hub/docker/docker-compose.yml $(DC_STOP_CMD) cogstack-jupyter-hub
stop-medcat-trainer:
$(WITH_ENV) docker compose -f ../services/cogstack-nlp/medcat-trainer/docker-compose-prod.yml $(DC_STOP_CMD) medcattrainer nginx solr
stop-medcat-service:
$(WITH_ENV) docker compose -f ../services/cogstack-nlp/medcat-service/docker/docker-compose.yml $(DC_STOP_CMD) nlp-medcat-service-production
stop-medcat-service-deid:
$(WITH_ENV) docker compose -f ../services/cogstack-nlp/medcat-service/docker/docker-compose.yml $(DC_STOP_CMD) nlp-medcat-service-production-deid
stop-git-ea:
$(WITH_ENV) docker compose -f services.yml ${DC_STOP_CMD} gitea
stop-ocr-services:
$(WITH_ENV) docker compose -f ../services/ocr-service/docker/docker-compose.base.yml -f ../services/ocr-service/docker/docker-compose.prod.yml $(DC_STOP_CMD) ocr-service ocr-service-text-only
stop-production-db:
$(WITH_ENV) docker compose -f services.yml $(DC_STOP_CMD) cogstack-databank-db
stop-data-infra: stop-nifi stop-elastic stop-samples
stop-all: stop-data-infra stop-jupyter stop-medcat-service stop-ocr-services
.PHONY: stop-data-infra stop-nifi stop-nifi-dev delete-nifi delete-nifi-containers delete-nifi-dev-containers delete-nifi-images delete-nifi-dev-images delete-nifi-volumes delete-elastic delete-elastic-volumes delete-databank delete-databank-volumes delete-samples-db delete-samples-db-volumes stop-elastic stop-samples stop-jupyter
# cleanup
#
down-all:
$(WITH_ENV) docker compose -f services.yml $(DC_DOWN_CMD)
# deletes volumes associated with containers
cleanup:
$(WITH_ENV) docker compose -f services.yml $(DC_DOWN_CMD) -v
.PHONY: down-all cleanup