From a1d5537a391a90856c326eaa5db6fd0a1709e8ee Mon Sep 17 00:00:00 2001 From: Michael Jackson Date: Thu, 16 Jul 2026 14:34:02 -0400 Subject: [PATCH] ENH: Refresh stale filter arguments in example pipelines * Round-trips 44 example pipelines through Pipeline::FromFile/toJson so every filter carries its current full parameter key set and version, eliminating the -5432/-5433 load warnings DREAM3D-NX shows * Value-preserving key renames: surface_mesh_face_ipf_colors_array_name -> first_face_ipf_colors_array_name, surface_mesh_face_misorientation_ colors_array_name -> misorientation_array_name, z_value_choice -> z_value_choice_index * GUI-level top-level fields (pipeline_uuid, workflowParams, pinnedParams) and all filter comments preserved * V&V comparison pipelines left untouched (provenance artifacts) Signed-off-by: Michael Jackson --- .../(02) Image Segmentation.d3dpipeline | 58 +++++++++++++- .../(03) Porosity Mesh Export.d3dpipeline | 60 ++++++++++++++- .../(04) Porosity Analysis.d3dpipeline | 58 +++++++++++++- ...AlignSectionsMutualInformation.d3dpipeline | 10 ++- .../EBSD_Hexagonal_Data_Analysis.d3dpipeline | 54 ++++++++++++- .../Edax_IPF_Colors.d3dpipeline | 6 +- .../EnsembleInfoReader.d3dpipeline | 42 +++++++--- .../ImportBrukerNanoEspritData.d3dpipeline | 10 ++- .../ImportEdaxOIMData.d3dpipeline | 10 ++- .../Read_EDAX_Ang_File.d3dpipeline | 6 +- .../Read_Oxford_Ctf_File.d3dpipeline | 6 +- .../TxCopper_Exposed.d3dpipeline | 6 +- .../TxCopper_Unexposed.d3dpipeline | 6 +- .../aptr12_Analysis.d3dpipeline | 76 +++++++++++++++++-- .../avtr12_Analysis.d3dpipeline | 76 +++++++++++++++++-- ...mall IN100 Full Reconstruction.d3dpipeline | 60 ++++++++++++++- ...IN100 Morphological Statistics.d3dpipeline | 19 +++-- ...00 Crystallographic Statistics.d3dpipeline | 57 ++++++++++++-- .../(05) Small IN100 Quick Mesh.d3dpipeline | 17 ++++- .../(06) Small IN100 Smooth Mesh.d3dpipeline | 13 +++- ...7) Small IN100 Mesh Statistics.d3dpipeline | 35 ++++++--- .../(08) Small IN100 GBCD.d3dpipeline | 13 +++- .../(09) Small IN100 GBCD Metric.d3dpipeline | 13 +++- .../pipelines/AppendImageGeometry.d3dpipeline | 10 ++- .../ApplyTransformation_Image.d3dpipeline | 12 ++- .../ApplyTransformation_Node.d3dpipeline | 12 ++- .../ArrayCalculatorExample.d3dpipeline | 22 ++++-- .../ComputeBiasedFeatures.d3dpipeline | 10 ++- .../ComputeBoundaryCells.d3dpipeline | 10 ++- .../ComputeLargestCrossSections.d3dpipeline | 10 ++- ...ure_Face_Curvature_Goldfeather.d3dpipeline | 10 ++- ...ure_Face_Curvature_Small_IN100.d3dpipeline | 18 ++++- .../pipelines/CreateScanVectors.d3dpipeline | 10 ++- .../pipelines/DBSDScan_2d_Example.d3dpipeline | 10 ++- .../ExtractFeatureBoundaries2D.d3dpipeline | 10 ++- .../ExtractVertexGeometry.d3dpipeline | 6 +- .../ResamplePorosityImage.d3dpipeline | 56 +++++++++++++- .../pipelines/Pad_Image_Geometry.d3dpipeline | 6 +- .../Import_CSV_File.d3dpipeline | 16 +++- .../Remove_Flagged_Triangles.d3dpipeline | 10 ++- ...eElementAttributesWithNeighbor.d3dpipeline | 16 +++- .../ResampleRectGridToImageGeom.d3dpipeline | 10 ++- .../pipelines/SurfaceNets_Demo.d3dpipeline | 64 +++++++++++++++- .../CombineStlFiles.d3dpipeline | 12 ++- 44 files changed, 937 insertions(+), 114 deletions(-) diff --git a/src/Plugins/ITKImageProcessing/pipelines/(02) Image Segmentation.d3dpipeline b/src/Plugins/ITKImageProcessing/pipelines/(02) Image Segmentation.d3dpipeline index c1ad23f879..cad4859290 100644 --- a/src/Plugins/ITKImageProcessing/pipelines/(02) Image Segmentation.d3dpipeline +++ b/src/Plugins/ITKImageProcessing/pipelines/(02) Image Segmentation.d3dpipeline @@ -13,6 +13,14 @@ "value": false, "version": 1 }, + "change_origin": { + "value": false, + "version": 1 + }, + "change_spacing": { + "value": false, + "version": 1 + }, "color_weights": { "value": [ 0.21250000596046448, @@ -25,6 +33,40 @@ "value": false, "version": 1 }, + "cropping_options": { + "value": { + "bounds_x_physical": [ + 0.0, + 0.0 + ], + "bounds_x_voxels": [ + 0, + 0 + ], + "bounds_y_physical": [ + 0.0, + 0.0 + ], + "bounds_y_voxels": [ + 0, + 0 + ], + "bounds_z_physical": [ + 0.0, + 0.0 + ], + "bounds_z_voxels": [ + 0, + 0 + ], + "crop_x": true, + "crop_y": true, + "crop_z": true, + "is_2d": false, + "type": 0 + }, + "version": 1 + }, "exact_xy_dimensions": { "value": [ 100, @@ -66,6 +108,10 @@ ], "version": 1 }, + "origin_spacing_processing_index": { + "value": 1, + "version": 1 + }, "output_image_geometry_path": { "value": "ImageDataContainer", "version": 1 @@ -226,7 +272,7 @@ "value": "NumElements", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "save_element_sizes": { "value": false, "version": 1 @@ -431,11 +477,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/ImagesStack/Images.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/ITKImageProcessing/pipelines/(03) Porosity Mesh Export.d3dpipeline b/src/Plugins/ITKImageProcessing/pipelines/(03) Porosity Mesh Export.d3dpipeline index f38496db01..ad4c92030e 100644 --- a/src/Plugins/ITKImageProcessing/pipelines/(03) Porosity Mesh Export.d3dpipeline +++ b/src/Plugins/ITKImageProcessing/pipelines/(03) Porosity Mesh Export.d3dpipeline @@ -13,6 +13,14 @@ "value": false, "version": 1 }, + "change_origin": { + "value": false, + "version": 1 + }, + "change_spacing": { + "value": false, + "version": 1 + }, "color_weights": { "value": [ 0.21250000596046448, @@ -25,6 +33,40 @@ "value": false, "version": 1 }, + "cropping_options": { + "value": { + "bounds_x_physical": [ + 0.0, + 0.0 + ], + "bounds_x_voxels": [ + 0, + 0 + ], + "bounds_y_physical": [ + 0.0, + 0.0 + ], + "bounds_y_voxels": [ + 0, + 0 + ], + "bounds_z_physical": [ + 0.0, + 0.0 + ], + "bounds_z_voxels": [ + 0, + 0 + ], + "crop_x": true, + "crop_y": true, + "crop_z": true, + "is_2d": false, + "type": 0 + }, + "version": 1 + }, "exact_xy_dimensions": { "value": [ 100, @@ -66,6 +108,10 @@ ], "version": 1 }, + "origin_spacing_processing_index": { + "value": 1, + "version": 1 + }, "output_image_geometry_path": { "value": "ImageDataContainer", "version": 1 @@ -226,6 +272,10 @@ "value": [], "version": 1 }, + "input_feature_data_array_paths": { + "value": [], + "version": 1 + }, "input_grid_geometry_path": { "value": "ImageDataContainer", "version": 1 @@ -555,11 +605,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Porosity_Analysis.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/ITKImageProcessing/pipelines/(04) Porosity Analysis.d3dpipeline b/src/Plugins/ITKImageProcessing/pipelines/(04) Porosity Analysis.d3dpipeline index d0d8aecc28..7ae63f0be2 100644 --- a/src/Plugins/ITKImageProcessing/pipelines/(04) Porosity Analysis.d3dpipeline +++ b/src/Plugins/ITKImageProcessing/pipelines/(04) Porosity Analysis.d3dpipeline @@ -13,6 +13,14 @@ "value": false, "version": 1 }, + "change_origin": { + "value": false, + "version": 1 + }, + "change_spacing": { + "value": false, + "version": 1 + }, "color_weights": { "value": [ 0.21250000596046448, @@ -25,6 +33,40 @@ "value": false, "version": 1 }, + "cropping_options": { + "value": { + "bounds_x_physical": [ + 0.0, + 0.0 + ], + "bounds_x_voxels": [ + 0, + 0 + ], + "bounds_y_physical": [ + 0.0, + 0.0 + ], + "bounds_y_voxels": [ + 0, + 0 + ], + "bounds_z_physical": [ + 0.0, + 0.0 + ], + "bounds_z_voxels": [ + 0, + 0 + ], + "crop_x": true, + "crop_y": true, + "crop_z": true, + "is_2d": false, + "type": 0 + }, + "version": 1 + }, "exact_xy_dimensions": { "value": [ 100, @@ -66,6 +108,10 @@ ], "version": 1 }, + "origin_spacing_processing_index": { + "value": 1, + "version": 1 + }, "output_image_geometry_path": { "value": "RoboMet.3D Image Stack", "version": 1 @@ -226,7 +272,7 @@ "value": "NumElements", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "save_element_sizes": { "value": false, "version": 1 @@ -496,11 +542,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/ImagesStack/Images.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/AlignSectionsMutualInformation.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/AlignSectionsMutualInformation.d3dpipeline index cc354741c9..159a93c67a 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/AlignSectionsMutualInformation.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/AlignSectionsMutualInformation.d3dpipeline @@ -197,11 +197,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/OrientationAnalysis/SmallIN100_AlignSectionsMutualInformation.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/EBSD_Hexagonal_Data_Analysis.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/EBSD_Hexagonal_Data_Analysis.d3dpipeline index ebd9da68f3..153502e6af 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/EBSD_Hexagonal_Data_Analysis.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/EBSD_Hexagonal_Data_Analysis.d3dpipeline @@ -195,6 +195,10 @@ "value": "DataContainer/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "DataContainer/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -203,7 +207,7 @@ "value": "DataContainer/Cell Data/Mask", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, @@ -711,7 +715,43 @@ "value": "DataContainer/Cell Ensemble Data/CrystalStructures", "version": 1 }, - "parameters_version": 1 + "parameters_version": 2, + "use_rodrigues_average": { + "value": true, + "version": 1 + }, + "use_vmf_average": { + "value": false, + "version": 1 + }, + "use_watson_average": { + "value": false, + "version": 1 + }, + "vmf_euler_array_name": { + "value": "vMF Avg EulerAngles", + "version": 1 + }, + "vmf_kappa_array_name": { + "value": "vMF Kappas", + "version": 1 + }, + "vmf_quat_array_name": { + "value": "vMF Avg Quats", + "version": 1 + }, + "watson_euler_array_name": { + "value": "Watson Avg EulerAngles", + "version": 1 + }, + "watson_kappa_array_name": { + "value": "Watson Kappas", + "version": 1 + }, + "watson_quat_array_name": { + "value": "Watson Avg Quats", + "version": 1 + } }, "comments": "", "filter": { @@ -812,11 +852,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Examples/Combo-EBSD-osc_r0c0_CAxis.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/Edax_IPF_Colors.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/Edax_IPF_Colors.d3dpipeline index b9e75ace7a..0c1b21196f 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/Edax_IPF_Colors.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/Edax_IPF_Colors.d3dpipeline @@ -186,6 +186,10 @@ "value": "DataContainer/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "DataContainer/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -194,7 +198,7 @@ "value": "DataContainer/Cell Data/Mask", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, diff --git a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/EnsembleInfoReader.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/EnsembleInfoReader.d3dpipeline index a9187ba882..dacd34f7b6 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/EnsembleInfoReader.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/EnsembleInfoReader.d3dpipeline @@ -48,6 +48,18 @@ }, { "args": { + "allow_partial_filling": { + "value": false, + "version": 1 + }, + "component_dimensions": { + "value": [ + [ + 4.0 + ] + ], + "version": 1 + }, "created_attribute_array_path": { "value": "[Image Geometry]/Cell Data/Quats", "version": 1 @@ -60,19 +72,15 @@ "value": "Data/OrientationAnalysis/quats.raw", "version": 1 }, - "component_dimensions": { - "value": [ - [ - 4.0 - ] - ], - "version": 1 - }, - "parameters_version": 1, + "parameters_version": 2, "scalar_type_index": { "value": 8, "version": 1 }, + "set_tuple_dimensions": { + "value": true, + "version": 1 + }, "skip_header_bytes": { "value": 0, "version": 1 @@ -212,6 +220,10 @@ "value": "[Image Geometry]/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "[Image Geometry]/Cell Ensemble/CrystalStructures", "version": 1 @@ -220,7 +232,7 @@ "value": "", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, @@ -243,11 +255,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Examples/EnsembleInfoReaderExample.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/ImportBrukerNanoEspritData.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/ImportBrukerNanoEspritData.d3dpipeline index 083c96a0f8..f816f9e3e1 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/ImportBrukerNanoEspritData.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/ImportBrukerNanoEspritData.d3dpipeline @@ -58,11 +58,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Examples/H5EspritData.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/ImportEdaxOIMData.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/ImportEdaxOIMData.d3dpipeline index 9d84f46a80..d59e77af9b 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/ImportEdaxOIMData.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/ImportEdaxOIMData.d3dpipeline @@ -159,11 +159,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Examples/EdaxOIMData.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/Read_EDAX_Ang_File.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/Read_EDAX_Ang_File.d3dpipeline index d04fb6277c..f6ec3290ec 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/Read_EDAX_Ang_File.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/Read_EDAX_Ang_File.d3dpipeline @@ -186,6 +186,10 @@ "value": "DataContainer/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "DataContainer/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -194,7 +198,7 @@ "value": "", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, diff --git a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/Read_Oxford_Ctf_File.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/Read_Oxford_Ctf_File.d3dpipeline index 7f09050175..1a8f60a083 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/Read_Oxford_Ctf_File.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/Read_Oxford_Ctf_File.d3dpipeline @@ -178,6 +178,10 @@ "value": "DataContainer/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "DataContainer/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -186,7 +190,7 @@ "value": "DataContainer/Cell Data/Mask", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, diff --git a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/TxCopper_Exposed.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/TxCopper_Exposed.d3dpipeline index 185ee30133..82cbc8a627 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/TxCopper_Exposed.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/TxCopper_Exposed.d3dpipeline @@ -253,6 +253,10 @@ "value": "Cugrid_after 2nd_15kv_2kx_2/EBSD Scan Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "Cugrid_after 2nd_15kv_2kx_2/Phase Data/CrystalStructures", "version": 1 @@ -261,7 +265,7 @@ "value": "Cugrid_after 2nd_15kv_2kx_2/EBSD Scan Data/Mask", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, diff --git a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/TxCopper_Unexposed.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/TxCopper_Unexposed.d3dpipeline index e95ccaf989..b4cfec64c1 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/TxCopper_Unexposed.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/TxCopper_Unexposed.d3dpipeline @@ -253,6 +253,10 @@ "value": "Cugrid_after 2nd_15kv_2kx_2/EBSD Scan Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "Cugrid_after 2nd_15kv_2kx_2/Phase Data/CrystalStructures", "version": 1 @@ -261,7 +265,7 @@ "value": "Cugrid_after 2nd_15kv_2kx_2/EBSD Scan Data/Mask", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, diff --git a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/aptr12_Analysis.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/aptr12_Analysis.d3dpipeline index 521054339e..07e12943ec 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/aptr12_Analysis.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/aptr12_Analysis.d3dpipeline @@ -237,6 +237,10 @@ "value": "fw-ar-IF1-aptr12-corr/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "fw-ar-IF1-aptr12-corr/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -245,7 +249,7 @@ "value": "", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, @@ -351,6 +355,10 @@ "value": "fw-ar-IF1-aptr12-corr/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "fw-ar-IF1-aptr12-corr/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -359,7 +367,7 @@ "value": "", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, @@ -465,6 +473,10 @@ "value": "fw-ar-IF1-aptr12-corr/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "fw-ar-IF1-aptr12-corr/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -473,7 +485,7 @@ "value": "", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 1.0, @@ -685,7 +697,7 @@ "value": "NumElements", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "save_element_sizes": { "value": false, "version": 1 @@ -783,7 +795,7 @@ "value": "NumElements", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "save_element_sizes": { "value": false, "version": 1 @@ -830,7 +842,43 @@ "value": "fw-ar-IF1-aptr12-corr/Cell Ensemble Data/CrystalStructures", "version": 1 }, - "parameters_version": 1 + "parameters_version": 2, + "use_rodrigues_average": { + "value": true, + "version": 1 + }, + "use_vmf_average": { + "value": false, + "version": 1 + }, + "use_watson_average": { + "value": false, + "version": 1 + }, + "vmf_euler_array_name": { + "value": "vMF Avg EulerAngles", + "version": 1 + }, + "vmf_kappa_array_name": { + "value": "vMF Kappas", + "version": 1 + }, + "vmf_quat_array_name": { + "value": "vMF Avg Quats", + "version": 1 + }, + "watson_euler_array_name": { + "value": "Watson Avg EulerAngles", + "version": 1 + }, + "watson_kappa_array_name": { + "value": "Watson Kappas", + "version": 1 + }, + "watson_quat_array_name": { + "value": "Watson Avg Quats", + "version": 1 + } }, "comments": "", "filter": { @@ -982,6 +1030,10 @@ "value": "FeatureAvgMisorientations", "version": 1 }, + "feature_euclidean_center_array_name": { + "value": "Euclidean Centers", + "version": 1 + }, "feature_ids_path": { "value": "fw-ar-IF1-aptr12-corr/Cell Data/FeatureIds", "version": 1 @@ -994,7 +1046,7 @@ "value": "Cell Data/GBEuclideanDistances", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "quats_array_path": { "value": "fw-ar-IF1-aptr12-corr/Cell Data/Quats", "version": 1 @@ -1163,11 +1215,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/fw-ar-IF1-aptr12-corr/fw-ar-IF1-aptr12-corr.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/avtr12_Analysis.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/avtr12_Analysis.d3dpipeline index c996a29a11..b02b7578dd 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/avtr12_Analysis.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/EBSD_File_Processing/avtr12_Analysis.d3dpipeline @@ -237,6 +237,10 @@ "value": "fw-ar-IF1-avtr12-corr/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "fw-ar-IF1-avtr12-corr/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -245,7 +249,7 @@ "value": "", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, @@ -351,6 +355,10 @@ "value": "fw-ar-IF1-avtr12-corr/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "fw-ar-IF1-avtr12-corr/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -359,7 +367,7 @@ "value": "", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, @@ -465,6 +473,10 @@ "value": "fw-ar-IF1-avtr12-corr/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "fw-ar-IF1-avtr12-corr/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -473,7 +485,7 @@ "value": "", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 1.0, @@ -685,7 +697,7 @@ "value": "NumElements", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "save_element_sizes": { "value": false, "version": 1 @@ -783,7 +795,7 @@ "value": "NumElements", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "save_element_sizes": { "value": false, "version": 1 @@ -830,7 +842,43 @@ "value": "fw-ar-IF1-avtr12-corr/Cell Ensemble Data/CrystalStructures", "version": 1 }, - "parameters_version": 1 + "parameters_version": 2, + "use_rodrigues_average": { + "value": true, + "version": 1 + }, + "use_vmf_average": { + "value": false, + "version": 1 + }, + "use_watson_average": { + "value": false, + "version": 1 + }, + "vmf_euler_array_name": { + "value": "vMF Avg EulerAngles", + "version": 1 + }, + "vmf_kappa_array_name": { + "value": "vMF Kappas", + "version": 1 + }, + "vmf_quat_array_name": { + "value": "vMF Avg Quats", + "version": 1 + }, + "watson_euler_array_name": { + "value": "Watson Avg EulerAngles", + "version": 1 + }, + "watson_kappa_array_name": { + "value": "Watson Kappas", + "version": 1 + }, + "watson_quat_array_name": { + "value": "Watson Avg Quats", + "version": 1 + } }, "comments": "", "filter": { @@ -982,6 +1030,10 @@ "value": "FeatureAvgMisorientations", "version": 1 }, + "feature_euclidean_center_array_name": { + "value": "Euclidean Centers", + "version": 1 + }, "feature_ids_path": { "value": "fw-ar-IF1-avtr12-corr/Cell Data/FeatureIds", "version": 1 @@ -994,7 +1046,7 @@ "value": "Cell Data/GBEuclideanDistances", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "quats_array_path": { "value": "fw-ar-IF1-avtr12-corr/Cell Data/Quats", "version": 1 @@ -1163,11 +1215,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/fw-ar-IF1-avtr12-corr/fw-ar-IF1-avtr12-corr.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(02) Small IN100 Full Reconstruction.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(02) Small IN100 Full Reconstruction.d3dpipeline index e3f710b999..aa65038062 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(02) Small IN100 Full Reconstruction.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(02) Small IN100 Full Reconstruction.d3dpipeline @@ -483,7 +483,43 @@ "value": "DataContainer/Cell Ensemble Data/CrystalStructures", "version": 1 }, - "parameters_version": 1 + "parameters_version": 2, + "use_rodrigues_average": { + "value": true, + "version": 1 + }, + "use_vmf_average": { + "value": false, + "version": 1 + }, + "use_watson_average": { + "value": false, + "version": 1 + }, + "vmf_euler_array_name": { + "value": "vMF Avg EulerAngles", + "version": 1 + }, + "vmf_kappa_array_name": { + "value": "vMF Kappas", + "version": 1 + }, + "vmf_quat_array_name": { + "value": "vMF Avg Quats", + "version": 1 + }, + "watson_euler_array_name": { + "value": "Watson Avg EulerAngles", + "version": 1 + }, + "watson_kappa_array_name": { + "value": "Watson Kappas", + "version": 1 + }, + "watson_quat_array_name": { + "value": "Watson Avg Quats", + "version": 1 + } }, "comments": "", "filter": { @@ -590,6 +626,10 @@ "version": 1 }, "parameters_version": 1, + "randomize_parent_ids": { + "value": false, + "version": 1 + }, "seed_array_name": { "value": "MergeTwins SeedValue", "version": 1 @@ -632,7 +672,7 @@ "value": "NumElements", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "save_element_sizes": { "value": false, "version": 1 @@ -959,6 +999,10 @@ "value": "DataContainer/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "DataContainer/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -967,7 +1011,7 @@ "value": "DataContainer/Cell Data/Mask", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, @@ -990,11 +1034,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Reconstruction/SmallIN100_Final.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(03) Small IN100 Morphological Statistics.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(03) Small IN100 Morphological Statistics.d3dpipeline index e8d0b99899..02ac5cc151 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(03) Small IN100 Morphological Statistics.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(03) Small IN100 Morphological Statistics.d3dpipeline @@ -7,8 +7,7 @@ "args": { "import_data_object": { "value": { - "data_paths": [ - ], + "data_paths": [], "file_path": "Data/Output/Reconstruction/SmallIN100_Final.dream3d", "path_import_policy": 0 }, @@ -103,7 +102,7 @@ "value": "NumElements", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "save_element_sizes": { "value": false, "version": 1 @@ -240,6 +239,7 @@ "value": "Neighborhoods", "version": 1 }, + "parameters_version": 2, "search_radius": { "value": 1.0, "version": 1 @@ -247,8 +247,7 @@ "search_radius_type_index": { "value": 0, "version": 1 - }, - "parameters_version": 2 + } }, "comments": "", "filter": { @@ -341,11 +340,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Statistics/SmallIN100_Morph.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(04) Small IN100 Crystallographic Statistics.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(04) Small IN100 Crystallographic Statistics.d3dpipeline index ac6002ebb9..634d8a893d 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(04) Small IN100 Crystallographic Statistics.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(04) Small IN100 Crystallographic Statistics.d3dpipeline @@ -7,8 +7,7 @@ "args": { "import_data_object": { "value": { - "data_paths": [ - ], + "data_paths": [], "file_path": "Data/Output/Statistics/SmallIN100_Morph.dream3d", "path_import_policy": 0 }, @@ -53,7 +52,43 @@ "value": "DataContainer/Cell Ensemble Data/CrystalStructures", "version": 1 }, - "parameters_version": 1 + "parameters_version": 2, + "use_rodrigues_average": { + "value": true, + "version": 1 + }, + "use_vmf_average": { + "value": false, + "version": 1 + }, + "use_watson_average": { + "value": false, + "version": 1 + }, + "vmf_euler_array_name": { + "value": "vMF Avg EulerAngles", + "version": 1 + }, + "vmf_kappa_array_name": { + "value": "vMF Kappas", + "version": 1 + }, + "vmf_quat_array_name": { + "value": "vMF Avg Quats", + "version": 1 + }, + "watson_euler_array_name": { + "value": "Watson Avg EulerAngles", + "version": 1 + }, + "watson_kappa_array_name": { + "value": "Watson Kappas", + "version": 1 + }, + "watson_quat_array_name": { + "value": "Watson Avg Quats", + "version": 1 + } }, "comments": "", "filter": { @@ -198,6 +233,10 @@ "value": "FeatureAvgMisorientations", "version": 1 }, + "feature_euclidean_center_array_name": { + "value": "Euclidean Centers", + "version": 1 + }, "feature_ids_path": { "value": "DataContainer/Cell Data/FeatureIds", "version": 1 @@ -210,7 +249,7 @@ "value": "Cell Data/GBEuclideanDistances", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "quats_array_path": { "value": "DataContainer/Cell Data/Quats", "version": 1 @@ -272,11 +311,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Statistics/SmallIN100_CrystalStats.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(05) Small IN100 Quick Mesh.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(05) Small IN100 Quick Mesh.d3dpipeline index 8d911433d4..483fa71e4c 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(05) Small IN100 Quick Mesh.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(05) Small IN100 Quick Mesh.d3dpipeline @@ -7,8 +7,7 @@ "args": { "import_data_object": { "value": { - "data_paths": [ - ], + "data_paths": [], "file_path": "Data/Output/Statistics/SmallIN100_CrystalStats.dream3d", "path_import_policy": 0 }, @@ -149,6 +148,10 @@ "value": [], "version": 1 }, + "input_feature_data_array_paths": { + "value": [], + "version": 1 + }, "input_grid_geometry_path": { "value": "DataContainer", "version": 1 @@ -180,11 +183,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/SurfaceMesh/SmallIN100_Mesh.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(06) Small IN100 Smooth Mesh.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(06) Small IN100 Smooth Mesh.d3dpipeline index ac3a5171ec..127d81a61a 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(06) Small IN100 Smooth Mesh.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(06) Small IN100 Smooth Mesh.d3dpipeline @@ -7,8 +7,7 @@ "args": { "import_data_object": { "value": { - "data_paths": [ - ], + "data_paths": [], "file_path": "Data/Output/SurfaceMesh/SmallIN100_Mesh.dream3d", "path_import_policy": 0 }, @@ -80,11 +79,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/SurfaceMesh/SmallIN100_Smoothed.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(07) Small IN100 Mesh Statistics.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(07) Small IN100 Mesh Statistics.d3dpipeline index dd8acca1f0..a40d328662 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(07) Small IN100 Mesh Statistics.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(07) Small IN100 Mesh Statistics.d3dpipeline @@ -7,8 +7,7 @@ "args": { "import_data_object": { "value": { - "data_paths": [ - ], + "data_paths": [], "file_path": "Data/Output/SurfaceMesh/SmallIN100_Smoothed.dream3d", "path_import_policy": 0 }, @@ -82,6 +81,10 @@ }, { "args": { + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "DataContainer/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -94,11 +97,15 @@ "value": "DataContainer/Cell Feature Data/Phases", "version": 1 }, - "parameters_version": 1, - "surface_mesh_face_ipf_colors_array_name": { + "first_face_ipf_colors_array_name": { "value": "FaceIPFColors", "version": 1 }, + "parameters_version": 2, + "second_face_ipf_colors_array_name": { + "value": "Face IPF Colors (1)", + "version": 1 + }, "surface_mesh_face_labels_array_path": { "value": "TriangleDataContainer/Face Data/FaceLabels", "version": 1 @@ -129,13 +136,13 @@ "value": "DataContainer/Cell Feature Data/Phases", "version": 1 }, - "parameters_version": 1, - "surface_mesh_face_labels_array_path": { - "value": "TriangleDataContainer/Face Data/FaceLabels", + "misorientation_array_name": { + "value": "FaceMisorientationColors", "version": 1 }, - "surface_mesh_face_misorientation_colors_array_name": { - "value": "FaceMisorientationColors", + "parameters_version": 2, + "surface_mesh_face_labels_array_path": { + "value": "TriangleDataContainer/Face Data/FaceLabels", "version": 1 } }, @@ -148,11 +155,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/SurfaceMesh/SmallIN100_MeshStats.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(08) Small IN100 GBCD.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(08) Small IN100 GBCD.d3dpipeline index 37edb0e8ba..02d76947dd 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(08) Small IN100 GBCD.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(08) Small IN100 GBCD.d3dpipeline @@ -7,8 +7,7 @@ "args": { "import_data_object": { "value": { - "data_paths": [ - ], + "data_paths": [], "file_path": "Data/Output/SurfaceMesh/SmallIN100_MeshStats.dream3d", "path_import_policy": 0 }, @@ -287,11 +286,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/SurfaceMesh/SmallIN100_GBCD.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(09) Small IN100 GBCD Metric.d3dpipeline b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(09) Small IN100 GBCD Metric.d3dpipeline index cef5c1e8f5..eaf835ade6 100644 --- a/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(09) Small IN100 GBCD Metric.d3dpipeline +++ b/src/Plugins/OrientationAnalysis/pipelines/Small_IN100_Processing/(09) Small IN100 GBCD Metric.d3dpipeline @@ -7,8 +7,7 @@ "args": { "import_data_object": { "value": { - "data_paths": [ - ], + "data_paths": [], "file_path": "Data/Output/SurfaceMesh/SmallIN100_MeshStats.dream3d", "path_import_policy": 0 }, @@ -148,11 +147,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/SurfaceMesh/SmallIN100_GBCD_Metric.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/AppendImageGeometry.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/AppendImageGeometry.d3dpipeline index 92f7261257..c02b6262f2 100644 --- a/src/Plugins/SimplnxCore/pipelines/AppendImageGeometry.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/AppendImageGeometry.d3dpipeline @@ -525,11 +525,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Examples/AppendImageGeometry.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/ApplyTransformation_Image.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/ApplyTransformation_Image.d3dpipeline index 80baf5bdf3..045a4a7556 100644 --- a/src/Plugins/SimplnxCore/pipelines/ApplyTransformation_Image.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/ApplyTransformation_Image.d3dpipeline @@ -652,11 +652,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Transformation/ApplyTransformation_Image.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 @@ -672,4 +680,4 @@ ], "version": 1, "workflowParams": [] -} \ No newline at end of file +} diff --git a/src/Plugins/SimplnxCore/pipelines/ApplyTransformation_Node.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/ApplyTransformation_Node.d3dpipeline index 46d8a0df08..2e0e6a7cd9 100644 --- a/src/Plugins/SimplnxCore/pipelines/ApplyTransformation_Node.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/ApplyTransformation_Node.d3dpipeline @@ -484,11 +484,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/ApplyTransformation_Node.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 @@ -504,4 +512,4 @@ ], "version": 1, "workflowParams": [] -} \ No newline at end of file +} diff --git a/src/Plugins/SimplnxCore/pipelines/ArrayCalculatorExample.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/ArrayCalculatorExample.d3dpipeline index ed119012e7..54abf89a92 100644 --- a/src/Plugins/SimplnxCore/pipelines/ArrayCalculatorExample.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/ArrayCalculatorExample.d3dpipeline @@ -145,7 +145,7 @@ }, "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "scalar_type_index": { "value": 8, "version": 1 @@ -172,7 +172,7 @@ }, "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "scalar_type_index": { "value": 8, "version": 1 @@ -199,7 +199,7 @@ }, "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "scalar_type_index": { "value": 8, "version": 1 @@ -226,7 +226,7 @@ }, "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "scalar_type_index": { "value": 9, "version": 1 @@ -253,7 +253,7 @@ }, "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "scalar_type_index": { "value": 8, "version": 1 @@ -280,7 +280,7 @@ }, "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "scalar_type_index": { "value": 8, "version": 1 @@ -295,11 +295,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/ArrayCalculatorExampleResults.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/ComputeBiasedFeatures.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/ComputeBiasedFeatures.d3dpipeline index 87cd707b1c..2188565011 100644 --- a/src/Plugins/SimplnxCore/pipelines/ComputeBiasedFeatures.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/ComputeBiasedFeatures.d3dpipeline @@ -205,11 +205,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Examples/ComputeBiasedFeatures.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/ComputeBoundaryCells.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/ComputeBoundaryCells.d3dpipeline index 3e00f1e7b5..d3bcbc2295 100644 --- a/src/Plugins/SimplnxCore/pipelines/ComputeBoundaryCells.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/ComputeBoundaryCells.d3dpipeline @@ -86,11 +86,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Examples/SmallIN100_BoundaryCells.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/ComputeLargestCrossSections.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/ComputeLargestCrossSections.d3dpipeline index 1e81b5c5a6..643bf9978c 100644 --- a/src/Plugins/SimplnxCore/pipelines/ComputeLargestCrossSections.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/ComputeLargestCrossSections.d3dpipeline @@ -232,11 +232,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Examples/SmallIN100_LargestCrossSections.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/Compute_Feature_Face_Curvature_Goldfeather.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/Compute_Feature_Face_Curvature_Goldfeather.d3dpipeline index cf721cacdf..335004828e 100644 --- a/src/Plugins/SimplnxCore/pipelines/Compute_Feature_Face_Curvature_Goldfeather.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/Compute_Feature_Face_Curvature_Goldfeather.d3dpipeline @@ -501,11 +501,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/6_5_Goldfeather/6_5_Goldfeather.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/Compute_Feature_Face_Curvature_Small_IN100.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/Compute_Feature_Face_Curvature_Small_IN100.d3dpipeline index af1c00d98e..9c4cead2d8 100644 --- a/src/Plugins/SimplnxCore/pipelines/Compute_Feature_Face_Curvature_Small_IN100.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/Compute_Feature_Face_Curvature_Small_IN100.d3dpipeline @@ -170,6 +170,14 @@ "value": "DataContainer/Cell Data/FeatureIds", "version": 1 }, + "input_data_array_paths": { + "value": [], + "version": 1 + }, + "input_feature_data_array_paths": { + "value": [], + "version": 1 + }, "input_grid_geometry_path": { "value": "DataContainer", "version": 1 @@ -377,11 +385,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Small IN100 Face Curvature.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/CreateScanVectors.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/CreateScanVectors.d3dpipeline index 9430500b8c..fb3ce11d47 100644 --- a/src/Plugins/SimplnxCore/pipelines/CreateScanVectors.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/CreateScanVectors.d3dpipeline @@ -185,11 +185,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/ScanVectors/ExampleAMScanVectors.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/DBSDScan_2d_Example.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/DBSDScan_2d_Example.d3dpipeline index 0efda57882..96b0b30e08 100644 --- a/src/Plugins/SimplnxCore/pipelines/DBSDScan_2d_Example.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/DBSDScan_2d_Example.d3dpipeline @@ -1374,11 +1374,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/dbscan_2d/dbscan_2d_example.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/ExtractFeatureBoundaries2D.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/ExtractFeatureBoundaries2D.d3dpipeline index 53658801a9..cb3161936c 100644 --- a/src/Plugins/SimplnxCore/pipelines/ExtractFeatureBoundaries2D.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/ExtractFeatureBoundaries2D.d3dpipeline @@ -237,6 +237,10 @@ "value": "fw-ar-IF1-avtr12-corr/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "fw-ar-IF1-avtr12-corr/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -245,7 +249,7 @@ "value": "", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, @@ -386,7 +390,7 @@ "value": "NumElements", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "save_element_sizes": { "value": false, "version": 1 @@ -485,7 +489,7 @@ "version": 1 }, "parameters_version": 1, - "z_value_choice": { + "z_value_choice_index": { "value": 1, "version": 1 } diff --git a/src/Plugins/SimplnxCore/pipelines/ExtractVertexGeometry.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/ExtractVertexGeometry.d3dpipeline index 66cd7fc03f..cd2c41bb66 100644 --- a/src/Plugins/SimplnxCore/pipelines/ExtractVertexGeometry.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/ExtractVertexGeometry.d3dpipeline @@ -186,6 +186,10 @@ "value": "DataContainer/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "DataContainer/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -194,7 +198,7 @@ "value": "", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, diff --git a/src/Plugins/SimplnxCore/pipelines/Image_Processing/ResamplePorosityImage.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/Image_Processing/ResamplePorosityImage.d3dpipeline index 3c6063738d..7f728c4b4f 100644 --- a/src/Plugins/SimplnxCore/pipelines/Image_Processing/ResamplePorosityImage.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/Image_Processing/ResamplePorosityImage.d3dpipeline @@ -13,6 +13,14 @@ "value": false, "version": 1 }, + "change_origin": { + "value": false, + "version": 1 + }, + "change_spacing": { + "value": false, + "version": 1 + }, "color_weights": { "value": [ 0.21250000596046448, @@ -25,6 +33,40 @@ "value": false, "version": 1 }, + "cropping_options": { + "value": { + "bounds_x_physical": [ + 0.0, + 0.0 + ], + "bounds_x_voxels": [ + 0, + 0 + ], + "bounds_y_physical": [ + 0.0, + 0.0 + ], + "bounds_y_voxels": [ + 0, + 0 + ], + "bounds_z_physical": [ + 0.0, + 0.0 + ], + "bounds_z_voxels": [ + 0, + 0 + ], + "crop_x": true, + "crop_y": true, + "crop_z": true, + "is_2d": false, + "type": 0 + }, + "version": 1 + }, "exact_xy_dimensions": { "value": [ 100, @@ -66,6 +108,10 @@ ], "version": 1 }, + "origin_spacing_processing_index": { + "value": 1, + "version": 1 + }, "output_image_geometry_path": { "value": "Porosity_Image", "version": 1 @@ -286,11 +332,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/ResamplePorosityImage.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/Pad_Image_Geometry.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/Pad_Image_Geometry.d3dpipeline index e3597513c5..f1f359f830 100644 --- a/src/Plugins/SimplnxCore/pipelines/Pad_Image_Geometry.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/Pad_Image_Geometry.d3dpipeline @@ -184,6 +184,10 @@ "value": "ImageGeom/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "ImageGeom/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -192,7 +196,7 @@ "value": "", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, diff --git a/src/Plugins/SimplnxCore/pipelines/Read_Data_Files/Import_CSV_File.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/Read_Data_Files/Import_CSV_File.d3dpipeline index 266ef9c6ed..f4b5689bf1 100644 --- a/src/Plugins/SimplnxCore/pipelines/Read_Data_Files/Import_CSV_File.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/Read_Data_Files/Import_CSV_File.d3dpipeline @@ -5,11 +5,19 @@ "pipeline": [ { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Import_ASCII_IPF.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 @@ -244,6 +252,10 @@ "value": "[Image Geometry]/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "[Image Geometry]/EnsembleAttributeMatrix/CrystalStructures", "version": 1 @@ -252,7 +264,7 @@ "value": "", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, diff --git a/src/Plugins/SimplnxCore/pipelines/Remove_Flagged_Triangles.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/Remove_Flagged_Triangles.d3dpipeline index d79e57cf9d..5a953fff91 100644 --- a/src/Plugins/SimplnxCore/pipelines/Remove_Flagged_Triangles.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/Remove_Flagged_Triangles.d3dpipeline @@ -184,11 +184,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/remove_flagged_elements_data/remove_flagged_triangles_data.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/ReplaceElementAttributesWithNeighbor.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/ReplaceElementAttributesWithNeighbor.d3dpipeline index 58d80f12be..aa09671e8a 100644 --- a/src/Plugins/SimplnxCore/pipelines/ReplaceElementAttributesWithNeighbor.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/ReplaceElementAttributesWithNeighbor.d3dpipeline @@ -321,6 +321,10 @@ "value": "DataContainer/Cell Data/Phases", "version": 1 }, + "color_key_index": { + "value": 0, + "version": 1 + }, "crystal_structures_array_path": { "value": "DataContainer/Cell Ensemble Data/CrystalStructures", "version": 1 @@ -329,7 +333,7 @@ "value": "DataContainer/Cell Data/Mask", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, "reference_dir": { "value": [ 0.0, @@ -383,11 +387,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/Examples/ReplaceElementAttributesWithNeighbor.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/ResampleRectGridToImageGeom.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/ResampleRectGridToImageGeom.d3dpipeline index ae313c1d6a..a5b8d4c799 100644 --- a/src/Plugins/SimplnxCore/pipelines/ResampleRectGridToImageGeom.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/ResampleRectGridToImageGeom.d3dpipeline @@ -531,11 +531,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Examples/ResampleRectGridToImageGeom.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/SurfaceNets_Demo.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/SurfaceNets_Demo.d3dpipeline index 43fb83d73f..97256e6470 100644 --- a/src/Plugins/SimplnxCore/pipelines/SurfaceNets_Demo.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/SurfaceNets_Demo.d3dpipeline @@ -13,6 +13,14 @@ "value": false, "version": 1 }, + "change_origin": { + "value": false, + "version": 1 + }, + "change_spacing": { + "value": false, + "version": 1 + }, "color_weights": { "value": [ 0.21250000596046448, @@ -25,6 +33,40 @@ "value": false, "version": 1 }, + "cropping_options": { + "value": { + "bounds_x_physical": [ + 0.0, + 0.0 + ], + "bounds_x_voxels": [ + 0, + 0 + ], + "bounds_y_physical": [ + 0.0, + 0.0 + ], + "bounds_y_voxels": [ + 0, + 0 + ], + "bounds_z_physical": [ + 0.0, + 0.0 + ], + "bounds_z_voxels": [ + 0, + 0 + ], + "crop_x": true, + "crop_y": true, + "crop_z": true, + "is_2d": false, + "type": 0 + }, + "version": 1 + }, "exact_xy_dimensions": { "value": [ 100, @@ -66,6 +108,10 @@ ], "version": 1 }, + "origin_spacing_processing_index": { + "value": 1, + "version": 1 + }, "output_image_geometry_path": { "value": "RoboMet.3D Image Stack", "version": 1 @@ -222,6 +268,14 @@ "value": "RoboMet.3D Image Stack/Optical Data/FeatureIds", "version": 1 }, + "input_data_array_paths": { + "value": [], + "version": 1 + }, + "input_feature_data_array_paths": { + "value": [], + "version": 1 + }, "input_grid_geometry_path": { "value": "RoboMet.3D Image Stack", "version": 1 @@ -265,11 +319,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/SurfaceMesh/SurfaceNets_Demo.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 diff --git a/src/Plugins/SimplnxCore/pipelines/Write_Data_Files/CombineStlFiles.d3dpipeline b/src/Plugins/SimplnxCore/pipelines/Write_Data_Files/CombineStlFiles.d3dpipeline index 1817a6b730..0957d0add6 100644 --- a/src/Plugins/SimplnxCore/pipelines/Write_Data_Files/CombineStlFiles.d3dpipeline +++ b/src/Plugins/SimplnxCore/pipelines/Write_Data_Files/CombineStlFiles.d3dpipeline @@ -72,11 +72,19 @@ }, { "args": { + "compression_level": { + "value": 5, + "version": 1 + }, "export_file_path": { "value": "Data/Output/CombinedStlFiles.dream3d", "version": 1 }, - "parameters_version": 1, + "parameters_version": 2, + "use_compression": { + "value": true, + "version": 1 + }, "write_xdmf_file": { "value": true, "version": 1 @@ -92,4 +100,4 @@ ], "version": 1, "workflowParams": [] -} \ No newline at end of file +}